Langergren, J. et al. 2022. Phytobiomes Journal
Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics
John Lagergren, Mikaela Cashman, Veronica Melesse Vergara, Paul Eller, Joao Gabriel Felipe Machado Gazolla, Hari Chhetri, Jared Streich, Sharlee Climer, Peter Thornton, Wayne Joubert, & Daniel Jacobson
15 September 2022, Phytobiomes Journal; https://doi.org/10.1094/PBIOMES-02-22-0007-R
Abstract
Predicted growth in world population will put unparalleled stress on the need for sustainable energy and global food production, as well as increase the likelihood of future pandemics. In this work, we identify high-resolution environmental zones in the context of a changing climate and predict longitudinal processes relevant to these challenges. We do this using exhaustive vector comparison methods that measure the climatic similarity between all locations on earth at high geospatial resolution relative to global-scale analyses. The results are captured as networks, in which edges between geolocations are defined if their historical climate similarities exceed a threshold. We apply Markov clustering and our novel Correlation of Correlations method to the resulting climatic networks, which provides unprecedented agglomerative and longitudinal views of climatic relationships across the globe. The methods performed here resulted in the fastest (9.37×10^18 operations/sec) and one of the largest (168.7×10^21 operations) scientific computations ever performed, with more than 100 quadrillion edges considered for a single climatic network. Our climatic analysis reveals areas of the world experiencing rapid environmental changes, which can have important implications for global carbon fluxes and zoonotic spillover events. Correlation and network analyses of this kind are widely applicable across computational and predictive biology domains, including systems biology, ecology, carbon cycles, biogeochemistry, and zoonosis research.
Citation
Lagergren, J., Cashman, M., Melesse Vergara, V., Eller, P., Gazolla, J. G. F. M., Chhetri, H., Streich, J., Climer, S., Thornton, P., Joubert, W., & Jacobson, D. Climatic clustering and longitudinal analysis with impacts on food, bioenergy, and pandemics. Phytobiomes Journal, 0(ja), null. https://doi.org/10.1094/pbiomes-02-22-0007-r
