Weighill, D. A. and Jacobson, D. A. 2017. Advances in Biochemical Engineering/Biotechnology

Network Metamodeling: Effect of Correlation Metric Choice on Phylogenomic and Transcriptomic Network Topology

Deborah A. Weighill, and Daniel A. Jacobson
10 January 2017, Advances in Biochemical Engineering/Biotechnology 160: 143-183;  DOI: 10.1007/10_2016_46

Abstract

We explore the use of a network meta-modeling approach to compare the effects of similarity metrics used to construct biological networks on the topology of the resulting networks. This work reviews various similarity metrics for the construction of networks and various topology measures for the characterization of resulting network topology, demonstrating the use of these metrics in the construction and comparison of phylogenomic and transcriptomic networks.

Citation

Weighill, D. A. and D. Jacobson Network Metamodeling: Effect of Correlation Metric Choice on Phylogenomic and Transcriptomic Network Topology. Berlin, Heidelberg, Springer Berlin Heidelberg: 1-41.

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